Search results for: pubmed
18+ Ways to Improve your PubMed Searches
…happy searching – and get back to the bench! New PubMed The above information on how to improve your PubMed searches has been updated to reflect changes in PubMed searches…
Read MoreOut With the Old: New PubMed Search Tips
…to other sites (lower right) are enabled in the new PubMed The legacy PubMed will eventually be retired, meaning you will only have access to the new PubMed. That is…
Read MoreThree Cool Things You Didn’t Know You Could Do On PubMed
…PubMed with myNCBI. PubMed Tips I. Utilize the Search Options and Filters The PubMed search engine works basically like an Internet search engine. You enter keywords or phrases, and PubMed…
Read MoreSetting up a PubMed Alert in 3 Easy Steps
…And who enjoys manually searching and trawling through pages and pages of PubMed results, wondering if you’ve actually already seen this paper or not? The easiest way to keep abreast…
Read MoreUsing PubCrawler: How to Speed Up Your Literature Searches by Crawling
Want to know how PubCrawler can save you valuable time on your literature reviews? Read on… It often seems like a full-time job searching PubMed for the latest papers on…
Read MoreUseful Tips to Keep on Top of New Literature
…you out. Basically, you need to start making technology work for you! The Best Tools to Keep on Top of New Literature PubMed and Google Scholar When starting a new…
Read MoreStaying Alive: Tips for Air-Liquid Interface Cultures
…PubMed PMID: 20097829; PMCID: PMC2993091. 2. Nturibi E, Bhagwat AR, Coburn S, Myerburg MM, Lakdawala SS. Intracellular Colocalization of Influenza Viral RNA and Rab11A Is Dependent upon Microtubule Filaments. J…
Read MoreHow to Access Journal Articles Behind Paywalls
…latest research paper and sifting through PubMed [3] for sources to cite, and you come across an abstract where the authors describe experiments that would confirm or deny your burgeoning…
Read MoreFour Ways To Keep Up With Your Field If You Are Out Of A Job
…PubMed email alerts. Jot down a few keywords that cover the main aspects of your field and save these as searches in PubMed. Anytime a key paper is published, it…
Read MoreA Short History of Sequencing Part 1: from the first proteins to the Human Genome
…speaking! References Brownlee, Sanger and Barrell (1968) The sequence of 5 s ribosomal ribonucleic acid. J Mol Biol. 34:379-412. https://www.ncbi.nlm.nih.gov/pubmed/4938553 Sanger and Coulson (1975) A rapid method for determining sequences…
Read MorePros and Cons of CRISPR: Simple Tips for Weighing Up CRISPR for Genome Editing
…2), the number of publications using the technology has rocketed: there are more than 23,000 articles listed in PubMed alone. Considering the publication bias towards positive results (3), this means…
Read MoreTeach Yourself Python: A Guide for Biologists
…in PubMed, making literature searches a breeze. [1] Python, with its libraries, is a powerful tool that can manipulate, explore, and visualize complex data sets. Pandas [2] is used for…
Read MoreA Beginner’s Guide to Biocuration—and How to Become a Biocurator
…every single one of those databases needs curation. Even PubMed needs curation! Biocurators spend a lot of time creating shared vocabularies for the entries within a given database. These are…
Read MoreNavigating the sea of human genetics, Part II
…by first/last or all authors. This info is obtained using a behind-the-scenes tool that automatically parses PubMed affiliation data. Our SAD search results in 17 first/last authors and a total…
Read MoreNGS Quality Control in RNA Sequencing- Some Free Tools
…Sequence alignment/map (SAM) format and SAMtools. Bioinformatics, 25: 2078-9. PubMed PMID: 19505943 RSeQC Wang L, Wang S, Li W. (2012) RSeQC: quality control of RNA-seq experiments.Bioinformatics, 28: 2184-5. PubMed PMID:22743226…
Read MoreTop Factors to consider before applying to a lab
…to simply search the group leader or Professor on Pubmed to see a list of their publications. Another more accurate way to examine the quality of their publications is to…
Read MoreProtocols: Where Do You Get Yours?
…favorites, here is a list of some other great resources available: Pubmed: Using publications is a great way to get up-to-date information, but they don’t always give the full step-by-step…
Read MoreJust This Moment. Introducing the Science Behind Mindfulness and Meditation
…function. The science of meditation and mindfulness Scientific research into the effects of mindfulness is a rapidly expanding field. A quick PubMed search will bring up around 2800 papers including…
Read MoreThe EMSA – Teaching an Old Dog New Tricks
…assay procedure for the analysis of DNA replication complexes. 2004 Aug; 25(15: 2439-46. .https://www.ncbi.nlm.nih.gov/pubmed/15300760 Ream JA, et al. Rapid agarose gel electrophoretic mobility shift assay for quantitating protein: RNA interactions….
Read MoreHow To Get Organized With Reference Managers for Science—ReadCube Papers
…Hovering your mouse over the author’s information brings up their institutional address and ORCID ID, and you can search for their work on PubMed, Google Scholar, and Nature Publishing Journals,…
Read MoreA Step-by-Step Guide to Designing qPCR Primers
…Getting Started The first step in designing primers is to get the nucleotide sequence of your gene of interest. Go to the Pubmed gene database and search for your gene…
Read MoreTop 10 Tips for Phenol-Chloroform Extractions and Ethanol Precipitations
…go to your favorite search engine and see what other people online have said, and look over papers on PubMed for modified protocols. Odds are that you’re not the first…
Read More10 links: Free Mac Software for Molecular Biologists
…Pubmed searches can be performed and PDF files, complete with all metadata can be downloaded. Another piece of brilliant software from Mekentosj and a bargain at only 29 euros ($40)….
Read MoreInvestigating an Expression Quantitative Trait Locus (eQTL)
…search Pubmed for published papers. Or use the Expression Atlas at the European Bioinformatics Institute for datasets where groups have carried out large scale genotyping and RNA-sequencing studies. As a…
Read MoreScience Housekeeping Tasks to Tackle When You Aren’t in the Lab
…of time when you need to use them in your writing. Another possibility is to set up an automatic journal article alert. Several journal search engines, including PubMed and Google…
Read MoreKeeping Track of Your Literature
…to help you keep track of new publications, including Stork, PubCrawler, Feedly, PubMed alerts, and Google alerts. These apps and websites allow users to set up automatic searches of online…
Read More5 Tips to a Faster Thesis Using Labguru
…write your thesis, begin migrating every reference into the papers database of the knowledge module—whether through a quick upload of a PDF, a link from PubMed or even a mass…
Read MoreHow Text-Mining Tools Can Improve Your Literature Searches
…has suggested some possible interacting proteins you know nothing about. Or maybe you’re formulating a new hypothesis and want to find supporting evidence in the literature. PubMed is most scientist’s…
Read MoreDictyostelium as a Model
…SL, Doolittle WF. (1997) Origin and evolution of the slime molds (Mycetozoa). Proc Natl Acad Sci U S A 94(22):12007-12. Pubmed Articles in this series: Model Organisms in Biomedical Research…
Read MoreHow to Get Organized With Reference Managers for Science—EndNote
…PubMed and Web of Science directly from the reference manager program. Alternatively, EndNote also allows you to directly import PDFs you have already downloaded onto your computer. You can do…
Read More7 Tips for Getting Back into the Lab after a Job Change
…it before you know all the theory. New papers are coming out all the time, for example over 110,000 were published in January 2015 (data from PubMed Search) and no…
Read MoreHow to Publish Negative Results (And Everything Else in Your Lab Notebook)
…instances in which pre-prints are cited in peer-reviewed work). Other journals (e.g., Science Matters) lack consistent indexing on PubMed and other publication databases, making it more difficult for others to…
Read MoreCell Culture: a Case of Mistaken Identity
…Your Cell Culture On The Web Search PubMed for the cell line name and “cross contamination”. Check the database of International cell line authentication committee. In The Lab Short Tandem…
Read MoreWhat to Do During That Awkward One-Minute Spin
…PubMed to find the latest news. Or better yet, set up Google Alerts and scan through what arrives in your inbox on your favorite subjects. While one minute may not…
Read MoreEvolution Flow: The Historical Background of Flow Cytometry
…first used in the late 1970’s; PubMed shows that there were 13 publications using the term ‘Flow Cytometry’ in 1977, which can be compared to the 9726 publications in 2012….
Read MoreWhere to publish negative results
…author, currently $99 for the publishing of one paper. Unusually, the reviews are published alongside the paper. The papers are indexed in PubMed and other major databases. figshare Figshare is…
Read MoreHow to Share Your Journal Articles Legally
…publication if it’s on social media and not only PubMed, at which point they might contact you with a follow request or perhaps a question. This brings us to the…
Read MoreBuild A CV You Can Be Proud Of – Part III: Analytical Skills… Including the Dreaded Statistics!
…Our ability to carry out literature searches and subsequent analysis of the many hits we get following a PubMed query is itself a highly valued skill – fast literature searchers…
Read MoreWhat is a DOI and Why Should You Care?
…as PubMed or the journal? If after doing the above you still can’t access the article, you can report a broken DOI using the resolver tool. [2] Inputting a broken…
Read MoreApplications of Artificial Intelligence in Biology: An Easy Intro to AI for Researchers
…structure prediction and drug discovery. The increasing prevalence of AI in biology is evident when you review the number of search results on PubMed for the terms ‘AI’, ‘machine learning’,…
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