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Easier Gene Cloning With Positive Selection Cloning Vectors

Written by: Dr Nick Oswald

last updated: June 19, 2026

Isn’t it a pain to digest, purify, and dephosphorylate your cloning vector prep to prevent high background in your ligation/transformation? A new generation of positive selection cloning vectors promises to eliminate all of that hassle by killing off any vector that has not taken up the insert you are trying to clone.

Positive selection cloning vectors are currently available from Pure Biotech, ThermoFisher and Genhunter to name a few.

The positive selection comes from a conditionally expressed lethal gene, such as a restriction enzyme, whose coding sequence contains the multiple cloning site. The lethal gene is disrupted by the ligation of a DNA insert into the multiple cloning site.

Any undigested or self-ligated vector copies retain a functional copy of the lethal gene and are therefore selected against in the transformation. This is just one of several alternatives to antibiotics for selection in molecular cloning.

Choose a free resource to help you move forward

PROTOCOL

Chemically Competent Cells Protocol

Imagine having tube after tube of competent cells for your transformations, all (virtually) free of charge. The way to reach this nirvana is to make your own competent cells. Traditionally this can be a tricky feat, but the procedure laid out in this guide makes it simple and routine.
GET YOUR COPY

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The Molecular Cloning Cheat Sheet

Wondering how much insert you need, which strain you should use, if your DNA is pure enough, or if your vector needs electrocompetent cells? This printable reference card puts all those answers in one place. Set up correctly the first time, every time.
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This eliminates the need for extensive vector purification, and in fact the manufacturers say that no vector preparation is required at all for top notch cloning – just digest, ligate and transform without any purification at all and get close to 100% positive clones back. Sounds great – I think I might try it out!

Easier Gene Cloning With Positive Selection Cloning Vectors

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Nick has a PhD from the University Dundee and is the Founder and Director of Bitesize Bio, Science Squared Ltd and The Life Science Marketing Society.

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