Shoba Anantha
Shoba is Technical Specialist at a small biotech company in Wisconsin. She has MS in Biology/Information Technology from the University of North Carolina.
Recent Articles By Shoba
How to Build a Plate Centrifuge for $25
by Shoba on March 12, 2010
I recently visited a lab that had a salad spinner on their lab bench and at first I wondered if they were putting together a salad lunch there but when I took a peek I got a nice surprise. It turns out that the salad spinner was (read on...)
qPCR: Plexor vs Hydrolysis Probes
by Shoba on September 4, 2009
Hydrolysis probes, commonly also referred to as TaqmanTM is a very popular chemistry for real-time PCR. In this article I will compare hydrolysis probes with PlexorTM. But first, a quick overview of hydrolysis probes.
Hydrolysis (read on...)
qPCR: Plexor and SYBR compared
by Shoba on August 24, 2009
In my last article I introduced you to the Plexor System. And from that we already know that while in reactions that user SYBR Green for detection, fluorescence increases with accumulation of PCR product, with Plexor the (read on...)
Get the qPCR Fluorescence Low Down with Plexorâ„?
by Shoba on August 20, 2009
In real-time PCR, there are two primary ways to detect amplicons using fluorescent monitoring. One is intercalator-based dyes such as SYBR Green, and the other is probe-based techniques (hydrolysis or hybridization probes).
All (read on...)
Touchdown PCR: A Primer and Some Tips
by Shoba on July 20, 2009
When I first heard of touchdown PCR, I thought of a landing aircraft, which, as it turns out is not a bad way to think about it.
But despite it's amenability to analogies and dreadful puns (see title), touch-down PCR (TD-PCR), a (read on...)
Controls and Tips for TA cloning
by Shoba on June 23, 2009
Controls are obviously extremely important when setting up experiments. Without them, meaningful interpretation of the experimental results can be impossible.
I say obviously, but in my previous job as a technical services (read on...)
DNA Jelly for Cell-Free Protein Synthesis
by Shoba on May 28, 2009
I had previously talked about the basics of cell-free protein synthesis and ways to improve yields from the technique. But recently I came across an article describing a technology that promises to dramatically improve the (read on...)
Solved:Low Yields in Cell-Free protein Synthesis
by Shoba on April 21, 2009
In my last article, I introduced Cell-Free Protein Synthesis.
Today I want to talk about a major bottleneck in in vitro cell-free protein expression; low yield.
Most often, paying attention to the important factors such as (read on...)
An Intro to Cell-free Protein synthesis
by Shoba on March 2, 2009
Cell-free protein synthesis (aka In vitro translation) refers to protein production in vitro using lysates generated that provide the cellular machinery necessary for synthesis. The lysates can be of bacterial or eukaryotic (read on...)
Quantitative RT-PCR: One-step or Two-step RT?
by Shoba on February 16, 2009
qRT-PCR (quantitative reverse transcription-polymerase chain reaction) is now the gold standard technique for mRNA detection and quantification, sensitive enough to enable quantification of RNA from a single cell.
The reverse (read on...)






