Low cost DNA gel documentation |
Equipment for photographing DNA gels stained with ethidium bromide (or other fluorescent dyes), doesn’t have to cost thousands of dollars. These days, great pictures can be obtained with a standard digital camera and an orange filter. Here’s how.
You will need:
To build it:
Update: Here’s a schematic diagram that shows how the whole thing should fit together. Let me know if you have any comments or questions.

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The Genetic Genealogist
I sure wish I’d known this when I was a graduate student! Recording gels digitally was a 20 minute procedure in our lab and the quality was never that good.
By the way, welcome to the DNA Network!
Zhong-Min Dai
This is very interesting and usefull.
I don’t know how to choose the filter. If I want to use a filter that green light can pass through, but blue light cannot, What characteristic should the filter be?
Nick
Hi –
I believe that you would want a green filter for that – such as the Kodak green CC filter series (see http://micro.magnet.fsu.edu/primer/photomicrography/ccfilters/ccgreen.html)
Zhong-Min Dai
Thank you very much!
Dan
You don’t even need the UV transilluminator. If you’re using sybr Green or sybrSafe, you simply use blue LEDs like a bicycle lamp or a strong torchlight.
Kate
Thanks! Your system seems like just what I need, but do you mean polystyrene ice bucket? or the polyurethane ice buckets they sell?
Nick
Hi Kate,
I was thinking of the polystyrene boxes that enzymes are normally delivered in (packed in dry ice). The reason these are best is that they have a thick bottom.
This means that, after you make a hole in the bottom of the box, the camera lens tube can be pushed through, and the filter taped over the other side of the hole.
I have added a diagram to the article to illustrate.
Kate
Nick,
Thanks. Actually, do you mean styrofoam?
I’ve been really busy this week but I mean to try the method as soon as I can, maybe today.
Thanks,
Kate
Nick
Hi Kate
Yes, styrofoam = polystyrene
Good luck with trying out the method. Be sure to post your results here!!
Kate
I made a gel doc using syrofoam box deep yellow 15 filter and my little digital camera. It seems to work best if I take the pictures in color, then convert to bw on the computer. Auto exposure and focusing seem OK. The problem it has is that there seems to be a reflection of the filter in the middle of the picture. It’s less obvious when I convert the picture to bw, however.
Is there a way to get rid of the reflection?
Nick
Hi Kate
I would suggest two things:
1) Modify the box so that the camera lens rests on the filter (i.e. so there is no gap between the lens and the filter)
and/or
2) Make sure that no external light gets in i.e. make sure the lens/lens tube fits snugly in the hole without letting any light in. If required, plug up any gaps with cotton wool or something.
Let me know if this fixed it.
ted choi
Max, have you actually used a blue LED lightsource for visualizing bands with sybrsafe? sounds like a great idea. can you describe what you used and how well it worked? is it bright enough for photography, and do you need more filtration than the orange filter specified at the beginning of this thread?
thanks,
ted
Pablo
Nick, did you use regular tape to fit the filter onto the box? I’m afraid I might ruin the filter after removing the tape from it…
Nick
Hi Pablo – you could using masking tape (decorator’s tape). That is designed to stick and unstick from things easily.
Pablo
Allright, I’ve ordered the filter from the net so I can’t test the system yet, but I think it will work neatly since the box fits our UV exactly. I’m not sure about their prices elsewhere, but a Geldoc costs tons here in Brazil, so this will sure help a lot. Thanks for putting this up!
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scott
pearlbiotech.com sells a blue light LED/electrophorhesis system that costs a huge amount less than other blue light illuminators and even less than the cost of comparable gel boxes.
disclaimer: i don’t have any association with pearl biotech, but i do like the idea of cheap but effective lab equipment.
Shana Garrett
I am SO doing this tomorrow. I have never in my life found a more useful website. I would pay for this type of advice!